Table 3 Multi-class remote fold recognition using the triple(1,3) kernel
From: Efficient use of unlabeled data for protein sequence classification: a comparative study
Method | Error | Top-5 Error | Balanced Error | Top-5 Balanced Error | F1 | Top-5 F1 |
|---|---|---|---|---|---|---|
full sequence | 50.81 | 17.92 | 71.95 | 27.80 | 28.92 | 73.93 |
region | 36.81 | 10.91 | 52.58 | 20.07 | 49.69 | 81.26 |
no tails (full seq.) | 48.21 | 19.71 | 70.42 | 33.37 | 30.91 | 73.39 |
max. length (full seq.) | 51.63 | 23.13 | 76.96 | 39.21 | 26.85 | 66.99 |