From: Modulation of p53 binding to MDM2: computational studies reveal important roles of Tyr100
 | Trajectory name | MDM2 | p53 | Length |
---|---|---|---|---|
1 | Mo3A | open | RMSD 3 Ã… | 10 ns |
2 | Mo6A | open | RMSD 6 Ã… | 10 ns |
3 | Mc3AT1 | closed | RMSD 3 Ã… | 20 ns |
4 | Mc3AT2 | closed | RMSD 3 Ã… | 20 ns |
5 | Mc6A | Closed | RMSD 6 Ã… | 40 ns |
6 | Mc6A7ns | simulation started from the snapshot taken at 7.5 ns of Mc6A | Â | 25 ns |
7 | M1n4A | Apo, model 1 | RMSD 4 Ã… | 20 ns |
8 | M1n6A | Apo, model 1 | RMSD 6 Ã… | 10 ns |
9 | M1n4AWT | Taken from M1n4A at the end of 20 ns | RMSD ~6 Ã… | 5 ns |
10 | M1n | Apo, model 1 | NIL | 20 ns |
11 | M2n119 | Apo, model 2 (Residue 1-119) | NIL | 15 ns |
12 | M4n119 | Apo, model 4 (Residue 1-119) | NIL | 10 ns |