Table 4 Fibril-forming Propensity of proteins in the Uniprot Knowledgebase classed based on Gene Ontology. The Predicted fibril-forming hexpeptides were identified by obtaining RI ≥ 7.
From: Prediction of amyloid fibril-forming segments based on a support vector machine
Accession number of Gene Ontology | Number of Proteins | Number of hexpeptides | Frequency of Predicted fibril-forming hexpeptides |
|---|---|---|---|
Biological process | 369935 | 131289447 | 0.12 ± 0.17 |
0065007 | 2963 | 1742818 | 0.10 ± 0.15 |
0009987 | 152145 | 50481819 | 0.12 ± 0.17 |
0032502 | 6179 | 3665307 | 0.09 ± 0.13 |
0051234 | 13655 | 6183514 | 0.13 ± 0.20 |
0002376 | 1070 | 442485 | 0.10 ± 0.14 |
0008152 | 151601 | 48557241 | 0.12 ± 0.17 |
0051704 | 1065 | 363310 | 0.10 ± 0.16 |
0032501 | 2209 | 1330066 | 0.10 ± 0.15 |
0048519 | 4002 | 1972548 | 0.09 ± 0.14 |
0048518 | 3638 | 1908650 | 0.09 ± 0.13 |
0050789 | 15286 | 7280097 | 0.10 ± 0.14 |
0050896 | 12705 | 5229936 | 0.11 ± 0.16 |
Cellular component | 162913 | 69117049 | 0.12 ± 0.18 |
0044464 | 125461 | 50190897 | 0.13 ± 0.19 |
0032991 | 5476 | 2915149 | 0.10 ± 0.14 |
0043226 | 12336 | 6332565 | 0.10 ± 0.14 |
0044422 | 16365 | 7892350 | 0.11 ± 0.17 |
0044423 | 1082 | 429344 | 0.10 ± 0.15 |
Molecular function | 251671 | 97593593 | 0.12 ± 0.17 |
0005488 | 93440 | 36212221 | 0.11 ± 0.16 |
0003824 | 131187 | 50137625 | 0.12 ± 0.18 |
0009055 | 1826 | 477887 | 0.16 ± 0.25 |
0030234 | 1107 | 631219 | 0.09 ± 0.14 |
0060089 | 2090 | 1299918 | 0.11 ± 0.16 |
0030528 | 4651 | 1815311 | 0.09 ± 0.13 |
0045182 | 4989 | 2029483 | 0.11 ± 0.17 |
0005215 | 10663 | 4173787 | 0.14 ± 0.21 |