Figure 1
From: SE: an algorithm for deriving sequence alignment from a pair of superimposed structures
Comparison of the average alignment accuracy. The 582 superimposed pairs of proteins were binned according to (A) the RMSD or (B) the sequence identity of CDD alignment and the average fraction of correctly aligned residues (f CAR ) were averaged over each bin for each program. The X-axis gives the bins labeled by the upper limit of the range. The numbers of structure pairs in each bin are shown in grey using the right-side Y-axis scale.