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Figure 14 | BMC Bioinformatics

Figure 14

From: Sequence-structure relations of pseudoknot RNA

Figure 14

Stack (loop) numbers in pseudoknot RNA. We present the stack distributions based on 3000 random sequences of length 80 for cross4 (lhs) and cross5 (rhs). In addition we display the normal distributions (lighter) as implied by theory with the parameters μ4 = 0.086554, σ 4 2 MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeq4Wdm3aa0baaSqaaiabisda0aqaaiabikdaYaaaaaa@2FAD@ = 0.0055685 and μ5 = 0.069467, σ 5 2 MathType@MTEF@5@5@+=feaagaart1ev2aaatCvAUfKttLearuWrP9MDH5MBPbIqV92AaeXatLxBI9gBaebbnrfifHhDYfgasaacPC6xNi=xH8viVGI8Gi=hEeeu0xXdbba9frFj0xb9qqpG0dXdb9aspeI8k8fiI+fsY=rqGqVepae9pg0db9vqaiVgFr0xfr=xfr=xc9adbaqaaeGaciGaaiaabeqaaeqabiWaaaGcbaGaeq4Wdm3aa0baaSqaaiabiwda1aqaaiabikdaYaaaaaa@2FAF@ = 0.0039688.

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