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Table 3 True bidirectional promoters we predict.

From: Searching for bidirectional promoters in Arabidopsis thaliana

ID

Pair1

Pair2

TRR

GO term

Function description

1

AT1G17600

AT1G17610

34.0984

GO:0005524 MF

GO:0004888 MF

ATP binding transmembrane receptor activity

2

AT3G51560

AT3G51570

34.6648

GO:0005524 MF

GO:0004888 MF

ATP binding transmembrane receptor activity

3

AT1G72840

AT1G72850

34.9711

GO:0005524 MF

GO:0004888 MF

ATP binding transmembrane receptor activity

4

AT4G36140

AT4G36150

47.5045

GO:0005524 MF

GO:0004888 MF

ATP binding transmembrane receptor activity

5

AT5G40090

AT5G40100

52.8796

GO:0005524 MF

GO:0004888 MF

ATP binding transmembrane receptor activity

6

AT2G23070

AT2G23080

31.2655

GO:0006468 BP

protein amino acid phosphorylation

7

AT1G07550

AT1G07560

38.9944

GO:0006468 BP

protein amino acid phosphorylation

8

AT5G35380

AT5G35390

40.0246

GO:0006468 BP

protein amino acid phosphorylation

9

AT3G46920

AT3G46930

44.4623

GO:0004712 MF

GO:0006468 BP

protein serine/threonine/tyrosine kinase activity protein amino acid phosphorylation

10

AT3G57710

AT3G57720

49.5564

GO:0006468 BP

protein amino acid phosphorylation

11

AT3G01940

AT3G01950

36.6986

GO:0031225 CC

anchored to membrane

12

AT2G48130

AT2G48140

59.6507

GO:0008289 MF

GO:0031225 CC

GO:0006869 BP

lipid binding anchored to membrane lipid transport

13

AT5G37415

AT5G37420

32.2238

GO:0003700 MF

transcription factor activity

14

AT5G41020

AT5G41030

55.2906

GO:0003700 MF

transcription factor activity

15

AT4G38840

AT4G38850

35.204

GO:0009733 BP

response to auxin stimulus

16

AT5G18050

AT5G18060

36.3317

GO:0009733 BP

response to auxin stimulus

17

AT5G19420

AT5G19430

49.0875

GO:0008270 MF

zinc ion binding

18

AT2G28910

AT2G28920

54.0639

GO:0008270 MF

zinc ion binding

19

AT2G19720

AT2G19730

30.9849

GO:0003735 MF

structural constituent of ribosome

20

AT1G50940

AT1G50950

41.0419

GO:0009055 MF

electron carrier activity

21

AT4G30680

AT4G30690

44.2758

GO:0003743 MF

translation initiation factor activity

22

AT1G09080

AT1G09090

46.4263

GO:0009408 BP

response to heat

23

AT1G65130

AT1G65140

52.4771

GO:0016790 MF

GO:0004843 MF

thiolester hydrolase activity ubiquitin-specific protease activity

24

AT5G47250

AT5G47260

52.5492

GO:0006511 BP

ubiquitin-dependent protein catabolic process

25

AT3G08000

AT3G08010

55.2916

GO:0003723 MF

RNA binding

26

AT5G01680

AT5G01690

56.6963

GO:0005451 MF

monovalent cation: proton antiporter activity

27

AT5G45250

AT5G45260

62.0555

GO:0042742 BP

defense response to bacterium

  1. Pair1 and pair2 represent the loci of two genes in a bidirectional gene pair, and "CC", "MF" and "BP" are acronyms of "cellular component", "molecular function" and "biological process"