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Table 1 Biologically functional enrichment analysis of the gene lists of eight clusters a

From: Principal component tests: applied to temporal gene expression data

Cluster ID Enriched PANTHER biological Processes p-value b
CL1-1 lipid, fatty acid and steroid metabolism  
  (GO: 0006629) 0.0003
  steroid metabolism (GO: 0008202) 0.0006
  cholesterol metabolism (GO: 0008203) 0.0253
CL1-2 blood clotting (GO: 0007596) 0.0068
  cell cycle (GO: 0007049) 0.0079
  oncogenesis 0.0101
  nucleoside, nucleotide and nucleic acid metabolism (GO: 0006139) 0.0119
  embryogenesis (GO: 0009700) 0.0435
  cell cycle control (GO: 0000074) 0.0376
  mRNA transcription (GO: 0006366) 0.0825
  cell proliferation and differentiation 0.0843
  (GO: 0031054; GO: 0008283) cell structure and motility (GO: 0007010) 0.0867
  immunity and defense (GO: 0006952) 0.0953
CL2-2 cell cycle 0.0325
CL2-7 No  
CL2-13 No  
CL2-14 immunity and defense (GO: 0006952) 0.0313
  developmental processes (GO: 0007275) 0.0432
  oncogenesis 0.0926
CL2-20 nucleoside, nucleotide and nucleic acid metabolism (GO: 0006139) 0.0796
CL2-23 lipid, fatty acid and steroid metabolism (GO: 0006629) 0.0084
  steroid metabolism (GO: 0008202) 0.0560
  1. a The aggregate of CL-1 and CL-2 approximately corresponds to the combination of CL2-2, CL-7, CL-13, CL-14, CL-20 and CL-23.
  2. b Corrected with Bonferroni method for multiple testing.
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