Table 1 Selected disease classes and their associated classification performance.
From: Integrative disease classification based on cross-platform microarray data
UMLS concepts | Datasets | Phenotype distance score (p-value) | ManiSVM accuracy | SVM accuracy |
|---|---|---|---|---|
C0027651 (Neoplasms), C0027660 (Neoplasms, Glandular and Epithelial), C0040300 (Body tissue), C0007097 (Carcinoma), C0027653 (Neoplasms by Site), C0027652 (Neoplasms by Histologic Type) | GDS1070 GDS1321 GDS1479 GDS505 | 3.50E-05 | 0.8421 | 0.6018 |
C0018981 (Hemic and Lymphatic Diseases), C0005773 (Blood Cells), C0018939 (Hematological Disease) | GDS1257 GDS1392 GDS539 GDS1320 GDS390 | 7.10E-05 | 0.8047 | 0.6253 |
C0007682 (CNS disorder), C0006111 (Brain Diseases), C0027765 (nervous system disorder) | GDS1331 GDS1726 GDS1065 | 9.99E-03 | 0.7569 | 0.6483 |
C0021311 (Infection), C0004615 (Bacterial Infections and Mycoses) | GDS1428 GDS1022 GDS539 GDS711 GDS1726 GDS1397 | 2.36E-04 | 0.7498 | 0.5253 |