Figure 6
From: Markov clustering versus affinity propagation for the partitioning of protein interaction graphs
Mass and Area Fractions of the AP and MCL solutions at varying noise levels. These values assess the intrinsic efficiency of a clustering in terms of the amount of edge mass captured, with higher values indicating improved efficiency (see Methods for detail). The Mass fraction summarizes how much of the total edge weight is captured within clusters. The Area fraction is a measure of cluster granularity, such that higher area fractions correspond to coarser clusterings (See text).