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Table 1 Prediction quality of liver specific CRMs in human.

From: Finding evolutionarily conserved cis-regulatory modules with a universal set of motifs

human gene

homolog species

prediction

ALDOB

mouse

incorrect

 

rat

incorrect

IGF1

mouse

correct

 

rat

correct

PAH

mouse

incorrect

 

rat

incorrect

PROC

mouse

correct

 

rat

correct

CYP7A1

mouse

incorrect

 

rat

incorrect

G6PC

mouse

correct

 

rat

correct

INS

mouse

incorrect

 

mouse

correct

 

rat

correct

 

rat

correct

  1. For each gene name in column 1, one row shows CRM prediction for one homolog (described in column 2).
  2. If the most significant prediction which overlaps the experimentally verified CRM is in the top 5 in the rarity ranking, we call it correct, and incorrect otherwise. An extended version of this table can be found in Additional file 1.