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Table 1 The connections of the rat reference profiles with a mouse gene signature

From: sscMap: An extensible Java application for connecting small-molecule drugs using gene-expression signatures

ref-set

set size

set score

set pvalue

stdev of rdscores

setscore/stdev

Drug2–Tissue2

3

0.0036

0.9716

0.0908

0.0394

Drug1–Tissue1

3

0.1553

0.0468

0.0790

1.9651

Drug1–Tissue2

3

0.0167

0.8638

0.0983

0.1694

Drug1–Tissue3

3

0.0221

0.7816

0.0799

0.2767

Drug2–Tissue1

3

-0.1934

0.0574

0.1020

-1.8953

Drug2–Tissue3

3

0.0648

0.3674

0.0709

0.9143

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BMC Bioinformatics

ISSN: 1471-2105

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