Table 1 Species, GenBank accession numbers and mtDNA genome size (bp) used for the tests.
From: CSA: An efficient algorithm to improve circular DNA multiple alignment
First set (Primates) | Second set (Mammals) | ||||
|---|---|---|---|---|---|
Species | Accession Number | Genome size (bp) | Species | Accession Number | Genome size (bp) |
Pan troglodytes | NC_001643 | 16554 | Artibeus jamaicensis | NC_002009 | 16651 |
Pan paniscus | NC_001644 | 16563 | Episoriculus fumidus | NC_003040 | 17488 |
Pongo pygmaeus | NC_001646 | 16389 | Ornithorhynchus anatinus | NC_000891 | 17019 |
Homo sapiens | NC_001807 | 16571 | Bos taurus | NC_001567 | 16338 |
Papio hamadryas | NC_001992 | 16521 | Mus musculus | NC_001569 | 16295 |
Hylobates lar | NC_002082 | 16472 | Balaenoptera musculus | NC_001601 | 16402 |
Pongo abelii | NC_002083 | 16499 | Equus caballus | NC_001640 | 16660 |
Cebus albifrons | NC_002763 | 16554 | Macropus robustus | NC_001794 | 16896 |
Nycticebus coucang | NC_002765 | 16764 | Homo sapiens | NC_001807 | 16571 |
Tarsius bancanus | NC_002811 | 16927 | Canis lupus familiaris | NC_002008 | 16727 |
Lemur catta | NC_004025 | 17036 | Macroscelides proboscideus | NC_004026 | 16641 |
Macaca mulatta | NC_005943 | 16564 | Lepus europaeus | NC_004028 | 17734 |
Trachypithecus obscurus | NC_006900 | 16560 | |||
Presbytis melalophos | NC_008217 | 16543 | |||
Chlorocebus tantalus | NC_009748 | 16368 | |||
Gorilla gorilla | NC_011120 | 16412 | |||
Third set (Distantly related sequences) | |||||
Species | Accession Number | Genome size (bp) | |||
16 Primates sequences (First set) | ---- | ----- | |||
Drosophila melanogaster | NC_001709 | 19517 | |||
Gallus gallus | NC_001323 | 16775 | |||
Crocodylus niloticus | NC_008142 | 16830 | |||