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Table 1 Pre-clustering statistics

From: A compartmentalized approach to the assembly of physical maps

 

Method

Threshold

Clusters

Singletons

Max. cluster size

Rice

sHYB

N/A

305

0

2,533

Rice

HYB

1.1

2

21

22,459

  

1.2

50

36

22,078

  

1.35

853

286

10,773

  

1.4

1,361

528

4,052

  

1.45

1,863

880

359

  

1.5

2,341

1,405

143

Rice

RESTR

1e-8

128

125

21,663

  

1e-10

1,247

357

258

  

1e-12

1,929

855

122

  

1e-15

2,959

3,007

79

  

1e-17

3,421

5,799

67

  

1e-20

3,085

12,399

59

  

1e-25

680

20,925

12

  

1e-30

8

22,470

2

Rice

RAND

N/A

1,901

0

113

Barley

sHYB

N/A

70

0

1,413

Barley

HYB

1.5

311

141

14,471

  

1.6

318

211

14,375

  

1.7

2,124

988

2,880