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Table 9 The experimental results for genotype data error correction using Affymetrix 50 K GeneChips data.

From: Linked region detection using high-density SNP genotype data via the minimum recombinant model of pedigree haplotype inference

 

precision

recall

linked region recovery

overlap/real

overlap/found

No error

97.74%

95.05%

100%

99.98%

92.46%

 

(69.62%)

(86.56%)

(100%)

(100%)

(91.78%)

0.1% error

84.40%

94.94%

100%

99.93%

92.00%

 

(67.19%)

(86.19%)

(100%)

(100%)

(91.13%)

0.5% error

79.00%

93.76%

100%

99.84%

92.57%

 

(61.81%)

(86.10%)

(100%)

(100%)

(91.94%)