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Table 7 The experimental results for pedigrees P9 to P12.

From: Linked region detection using high-density SNP genotype data via the minimum recombinant model of pedigree haplotype inference

 

P9

P10

P11

P12

No. of Breakpoints

23.43 (41.07)

18.46 (26.38)

37.44 (92.49)

20.68 (31.52)

precision

0.95 (0.40)

0.92 (0.49)

0.91 (0.29)

0.94 (0.47)

recall

0.91 (0.67)

0.89 (0.68)

0.89 (0.70)

0.91 (0.71)

length of real linked region (cM)

29.80

26.06

22.26

22.05

length of found linked region (cM)

32.01 (36.72)

28.26 (31.93)

24.07 (24.53)

29.78 (30.57)

overlap/real

1.00 (1.00)

1.00 (1.00)

1.00 (1.00)

1.00 (1.00)

overlap/found

0.90 (0.81)

0.91 (0.83)

0.90 (0.89)

0.80 (0.78)

linked region recovery

1.00 (1.00)

1.00 (1.00)

1.00 (1.00)

1.00 (90/95)

  1. The meaning of each line is the same as in Table 2.