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Figure 4 | BMC Bioinformatics

Figure 4

From: Construction and use of gene expression covariation matrix

Figure 4

Neighbourhood similarity p-value and positive correlation for pairs of probe sets targeting a common gene. In the lower part of the figure is plotted (in red) the cumulative distribution frequency (cdf) of the logarithm of the neighbourhood similarity p-values for the unique pairs category in network HG-U95-NR10 (this curve corresponds to those of Figure 3, with an inversion of the x and y axes; the probe set pairs to the left of the green vertical line have a log10(p-value) < -10). In the upper part of the figure is shown the positive correlation score of the same probe set pairs. Red crosses indicate probe set pairs with a score > 20 and log10(p-value) < -10. Blue crosses designate probe set pairs with a score <= 20 or a log10(p-value) >= -10.

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