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Table 1 Group ranking based on quartet scanning of the CRF03_AB data set.

From: Identifying recombinants in human and primate immunodeficiency virus sequence alignments using quartet scanning

Groups

r g (%)

 
 

d max

d av

CRF03_AB (2)

100.00%

100.00%

A (4)

90.03%

90.73%

B (2)

89.34%

90.30%

C (2)

82.59%

82.83%

D (2)

81.23%

82.71%

F (2)

80.31%

81.96%

  1. The group ranking values are listed as percentages of the highest ranked group; these values are shown for the maximum distance (dmax) and total distance (dav) from the mean position in the quartet-mapping triangle. The number of sequences per group is indicated between brackets