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Figure 6 | BMC Bioinformatics

Figure 6

From: Identifying recombinants in human and primate immunodeficiency virus sequence alignments using quartet scanning

Figure 6

HIV-1 Neighbor-net and maximum likelihood trees. (a) Neigbor-net for the HIV-1 group M data set excluding subtype G and subtype K sequences. Only splits are shown that were present in 75% of 1000 bootstrap replicates. Conflicting phylogenetic relationships are indicated with arrows. (b) HIV-1 Maximum likelihood trees for the structural genes gag, pol and env. The numbers at the nodes represent the bootstrap support percentages based on 1000 replicates. The subtype J sequences are indicated with a rectangle.

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BMC Bioinformatics

ISSN: 1471-2105

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