Skip to main content
Figure 4 | BMC Bioinformatics

Figure 4

From: SNP HiTLink: a high-throughput linkage analysis system employing dense SNP data

Figure 4

Results of pairwise analysis (a and b) by MLINK, multipoint parametric analysis (c and d), and multipoint nonparametric analysis (e and f) by Allegro employing microsatellite (a, c and e) and 100KSNP (b, d, and f) markers. SNP markers were selected as confidence score < 0.1, HWE > 0.05, call rate > 0.95, and intervals of 100 kb (for multipoint analysis). The x-axis represents the position on each chromosome and the y-axis represents calculated parametric LOD scores (allele sharing LOD), nonparametric linkage scores (NPL), or information measures (info).

Back to article page