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Table 1 10 K breakpoint recovery results

From: Most parsimonious haplotype allele sharing determination

 

i Linker

xPedPhase

Block-Extension

Pedigree

Precision

Recall

Precision

Recall

Precision

Recall

2-2

0.994

0.936

0.971

0.952

0.253

1.000

2–3

0.982

0.965

0.964

0.966

0.326

0.999

2-3-1

0.985

0.965

0.961

0.972

0.214

0.999

2-3-2

0.989

0.962

0.955

0.972

0.151

0.995

2-3-3

0.972

0.968

0.935

0.976

0.177

0.996

2-3-5

0.977

0.971

0.872

0.989

0.160

0.997

2-4-3

0.984

0.969

0.924

0.978

0.203

0.999

2-5-4

0.989

0.949

0.882

0.976

0.231

0.999

2-5-5

0.991

0.970

0.846

0.989

0.204

0.998

2-6-5

0.986

0.956

0.867

0.984

0.212

0.999

Average

0.984

0.964

0.912

0.978

0.213

0.998

  1. Breakpoint recovery results: Average breakpoint recovery precision and recall by i Linker, xPedPhase, and Block-Extension on 10 K genotype datasets.