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Table 2 Partner number (median, PNM and average, <PN>), observed (<ASA>obs) and calculated (<ASA>calc) (corresponding to <PN>) ASAs for different amino acid residues

From: Accessibility and partner number of protein residues, their relationship and a webserver, ContPlot for their display

Residue

Whole Residue

Side Chain

 

PNM

<PN>

<ASA>obs

<ASA>calc

PNM

<PN>

<ASA>obs

<ASA>calc

Gly

7.5

7.4 (2.2)

26.6 (24.5)

25.9

    

Ala

8.0

8.6 (2.5)

28.1 (30.9)

23.9

4.0

3.6 (1.9)

18.2 (21.2)

13.9

Ser

8.0

7.9 (2.6)

39.2 (33.2)

34.7

5.0

3.6 (2.0)

27.9 (24.2)

23.6

Cys

9.5

10.0 (2.3)

17.1 (21.0)

15.1

5.0

5.6 (1.7)

10.3 (15.7)

8.0

Thr

8.5

8.5 (2.6)

44.2 (36.0)

39.9

6.0

4.5 (2.2)

35.5 (30.0)

31.1

Asp

9.5

7.9 (2.5)

58.1 (37.2)

54.3

5.5

3.9 (2.1)

48.0 (30.6)

43.9

Pro

8.5

7.7 (2.6)

54.2 (39.5)

51.4

6.0

4.9 (2.4)

43.4 (32.8)

40.5

Asn

9.0

8.3 (2.7)

57.9 (40.8)

53.7

6.5

4.4 (2.3)

48.0 (33.7)

42.9

Val

9.5

10.3 (2.6)

24.1 (32.0)

20.3

5.5

6.0 (2.1)

19.0 (27.2)

13.5

Glu

9.5

8.4 (2.5)

73.4 (41.9)

70.7

5.5

4.0 (2.2)

63.8 (36.3)

59.9

Gln

9.0

9.0 (2.7)

68.6 (43.3)

62.1

6.5

4.6 (2.4)

59.6 (37.7)

54.6

His

9.5

9.7 (2.9)

53.8 (44.6)

48.2

6.0

5.7 (2.5)

46.5 (38.7)

40.1

Leu

9.5

11.0 (2.7)

28.8 (38.0)

21.9

6.5

6.6 (2.3)

23.3 (32.6)

16.9

Ile

8.5

11.0 (2.7)

25.0 (35.2)

18.9

6.5

6.9 (2.2)

20.5 (30.6)

15.2

Met

9.5

11.2 (3.1)

35.5 (45.8)

26.5

6.5

6.7 (2.6)

28.9 (38.1)

21.1

Lys

9.5

8.4 (2.4)

95.8 (42.9)

92.5

6.5

4.0 (2.1)

85.4 (37.0)

82.3

Phe

10.0

11.9 (2.9)

31.0 (39.8)

24.5

7.0

7.9 (2.5)

25.3 (35.1)

18.5

Tyr

10.0

11.5 (3.1)

45.5 (45.0)

38.2

7.5

7.5 (2.6)

39.7 (40.2)

33.8

Arg

11.0

10.1 (3.1)

85.5 (53.3)

80.0

8.0

5.8 (2.7)

77.3 (48.0)

70.4

Trp

11.0

12.6 (3.2)

43.5 (47.6)

36.9

8.0

8.8 (2.9)

37.8 (43.7)

29.3

  1. The standard deviations are in parentheses. <ASA>calc at a given <PN> is obtained using the equation provided in Table 1.